Donald F Senear: search on Z-Library

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1

5-Hydroxytryptophan as a new intrinsic probe for investigating protein-DNA interactions by analytical ultracentrifugation. Study of the effect of DNA on self-assembly of the bacteriophage .lambda. cI repressor

Laue, Thomas M., Senear, Donald F., Eaton, Steven, Ross, J. B. Alexander

Journal:

Year:

1993

Language:

english

File:

PDF, 472 KB

english, 1993

2

Alexa and Oregon Green dyes as fluorescence anisotropy probes for measuring protein–protein and protein–nucleic acid interactions

Elena Rusinova, Vira Tretyachenko-Ladokhina, Oana E. Vele, Donald F. Senear, J.B. Alexander Ross

Journal:

Analytical Biochemistry

Year:

2002

Language:

english

File:

PDF, 120 KB

english, 2002

3

[Methods in Enzymology] Numerical Computer Methods Volume 210 || [22] Simultaneous analysis for testing of models and parameter estimation

Senear, Donald F.

Year:

1992

Language:

english

File:

PDF, 967 KB

english, 1992

4

Linkage between Operator Binding and Dimer to Octamer Self-Assembly of Bacteriophage λ c I Repressor †

Rusinova, Elena, Ross, J. B. Alexander, Laue, Thomas M., Sowers, Lawrence C., Senear, Donald F.

Journal:

Year:

1997

Language:

english

File:

PDF, 200 KB

english, 1997

5

Effects of anomalous migration and DNA to protein ratios on resolution of equilibrium constants from gel mobility-shift assays

Dr. Donald F. Senear, Dennise D. Dalma-Weiszhausz, Michael Brenowitz

Journal:

ELECTROPHORESIS

Year:

1993

Language:

english

File:

PDF, 979 KB

english, 1993

6

An aromatic stacking interaction between subunits helps mediate DNA sequence specificity: operator site discrimination by phage λ cI repressor

Yao Te Huang, Elena Rusinova, J.B.Alexander Ross, Donald F Senear

Journal:

Journal of Molecular Biology

Year:

1997

Language:

english

File:

PDF, 1.04 MB

english, 1997

7

Current status of the molecular structure and function of the plasma sex steroid-binding protein (SBP)

Philip H. Petra, Frank Z. Stanczyk, Donald F. Senear, Pearl C. Namkung, Miles J. Novy, J.B.Alexander Ross, Eric Turner, John A. Brown

Journal:

Journal of Steroid Biochemistry

Year:

1983

Language:

english

File:

PDF, 1.19 MB

english, 1983

8

Effects of saccharide and salt binding on the dimer-tetramer equilibrium of concanavalin A

Senear, Donald F., Teller, David C.

Journal:

Year:

1981

Language:

english

File:

PDF, 1.20 MB

english, 1981

9

Flanking DNA-sequences contribute to the specific binding of cl-repressor and O R I

Brenowitz, Michael, Senear, Donald F., Ackers, Gary K.

Journal:

Nucleic Acids Research

Year:

1989

Language:

english

File:

PDF, 1.25 MB

english, 1989

10

Analysis of Protein and DNA-Mediated Contributions to Cooperative Assembly of Protein–DNA Complexes

Donald F. Senear, J.B.Alexander Ross, Thomas M. Laue

Journal:

Year:

1998

Language:

english

File:

PDF, 352 KB

english, 1998

11

Steady-state and time-resolved phosphorescence of wild-type and modified bacteriophage λcI repressors

Aaron K. Sato, Eric R. Bitten, Donald F. Senear, J. B. Alexander Ross, Kenneth W. Rousslang

Journal:

Journal of Fluorescence

Year:

1994

Language:

english

File:

PDF, 383 KB

english, 1994

12

The primary self-assembly reaction of bacteriophage .lambda. cI repressor dimers is to octamer

Senear, Donald F., Laue, Thomas M., Ross, J. B. Alexander, Waxman, Evan, Eaton, Steven, Rusinova, Elena

Journal:

Year:

1993

Language:

english

File:

PDF, 1.38 MB

english, 1993

13

David M. J. Lilley (Editor), DNA–Protein: Structural Interactions

Donald F. Senear

Journal:

Chromosome Research

Year:

1998

Language:

english

File:

PDF, 36 KB

english, 1998

14

Multiple Conformations of the Cytidine Repressor DNA-Binding Domain Coalesce to One upon Recognition of a Specific DNA Surface

Moody, Colleen L., Tretyachenko-Ladokhina, Vira, Laue, Thomas M., Senear, Donald F., Cocco, Melanie J.

Journal:

Year:

2011

Language:

english

File:

PDF, 4.21 MB

english, 2011

15

``Footprint'' Titrations Yield Valid Thermodynamic Isotherms

Michael Brenowitz, Donald F. Senear, Madeline A. Shea and Gary K. Ackers

Journal:

Proceedings of the National Academy of Sciences

Year:

1986

Language:

english

File:

PDF, 1.20 MB

english, 1986

16

Quantitative Analysis of Tryptophan Analogue Incorporation in Recombinant Proteins

Donald F. Senear, Robert A. Mendelson, Deborah B. Stone, Linda A. Luck, Elena Rusinova, J.B.Alexander Ross

Journal:

Analytical Biochemistry

Year:

2002

Language:

english

File:

PDF, 107 KB

english, 2002

17

Structures of oncogenic, suppressor and rescued p53 core-domain variants: mechanisms of mutant p53 rescue

Wallentine, Brad D., Wang, Ying, Tretyachenko-Ladokhina, Vira, Tan, Martha, Senear, Donald F., Luecke, Hartmut

Journal:

Acta Crystallographica Section D Biological Crystallography

Year:

2013

Language:

english

File:

PDF, 987 KB

english, 2013

18

Structure and Dynamics of the Cytidine Repressor DNA-Binding Domain

Moody, Colleen L., Tretyachenko-Ladokhina, Vira, Senear, Donald F., Cocco, Melanie J.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 36 KB

english, 2010

19

Comparison of operator-specific and nonspecific DNA binding of the .lambda. cI repressor: [KCl] and pH effects

Senear, Donald F., Batey, Robert

Journal:

Year:

1991

Language:

english

File:

PDF, 2.00 MB

english, 1991

20

Molecular mechanisms of functional rescue mediated by P53 tumor suppressor mutations

Yu-Hong Tan, Y. Morris Chen, Xiang Ye, Qiang Lu, Vira Tretyachenko-Ladokhina, Wei Yang, Donald F. Senear, Ray Luo

Journal:

Biophysical Chemistry

Year:

2009

Language:

english

File:

PDF, 582 KB

english, 2009

21

Flexibility and Adaptability in Binding of E. coli Cytidine Repressor to Different Operators Suggests a Role in Differential Gene Regulation

Vira Tretyachenko-Ladokhina, Melanie J. Cocco, Donald F. Senear

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 654 KB

english, 2006

22

[Methods in Enzymology] Energetics of Biological Macromolecules Part B Volume 295 || [20] Analysis of interactions between CytR and CRP at CytR-regulated promoters

Senear, Donald F.

Year:

1998

Language:

english

File:

PDF, 2.76 MB

english, 1998

23

Thermodynamics of concanavalin A dimer-tetramer self-association: sedimentation equilibrium studies

Senear, Donald F., Teller, David C.

Journal:

Year:

1981

Language:

english

File:

PDF, 1.80 MB

english, 1981

24

Thermodynamic investigation of monoclonal antibody alkylated nucleoside interaction as a model for epitope recognition on nucleic acids

Yuhasz, Stacieann C., Senear, Donald F., Adamkiewicz, Jurgen, Rajewsky, Manfred F., Ts'o, Paul O. P., Kan, Lousing

Journal:

Year:

1987

Language:

english

File:

PDF, 1.04 MB

english, 1987

25

Proteinase inhibitors I and II from leaves of wounded tomato plants: Purification and properties

Gregory Plunkett, Donald F. Senear, Glen Zuroske, Clarence A. Ryan

Journal:

Archives of Biochemistry and Biophysics

Year:

1982

Language:

english

File:

PDF, 962 KB

english, 1982

26

Role of Protein−Protein Bridging Interactions on Cooperative Assembly of DNA-Bound CRP−CytR−CRP Complex and Regulation of the Escherichia Coli CytR Regulon †

Chahla, Mayy, Wooll, John, Laue, Thomas M., Nguyen, Nghia, Senear, Donald F.

Journal:

Year:

2003

Language:

english

File:

PDF, 198 KB

english, 2003

27

Energetics of cooperative protein-DNA interactions: comparison between quantitative deoxyribonuclease footprint titration and filter binding

Senear, Donald F., Brenowitz, Michael, Shea, Madeline A., Ackers, Gary K.

Journal:

Year:

1986

Language:

english

File:

PDF, 2.14 MB

english, 1986

28

Thermodynamics of E. coli cytidine repressor interactions with DNA: distinct modes of binding to different operators suggests a role in differential gene regulation

Vira Tretyachenko-Ladokhina, J.B.Alexander Ross, Donald F Senear

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 296 KB

english, 2002

29

An Unusual Pattern of CytR and CRP Binding Energetics at Escherichia coli cddP Suggests a Unique Blend of Class I and Class II Mediated Activation

Holt, Allison K., Senear, Donald F.

Journal:

Year:

2010

Language:

english

File:

PDF, 2.68 MB

english, 2010

30

Proton-linked contributions to site-specific interactions of .lambda. cI repressor and OR

Senear, Donald F., Ackers, Gary K.

Journal:

Year:

1990

Language:

english

File:

PDF, 1.82 MB

english, 1990

31

Spectral Enhancement of Proteins: Biological Incorporation and Fluorescence Characterization of 5-Hydroxytryptophan in Bacteriophage λ cI Repressor

J. B. Alexander Ross, Donald F. Senear, Evan Waxman, Bamenga B. Kombo, Elena Rusinova, Yao Te Huang, William R. Laws and C. A. Hasselbacher

Journal:

Proceedings of the National Academy of Sciences

Year:

1992

Language:

english

File:

PDF, 992 KB

english, 1992

32

The Cooperative Binding Energetics of CytR and cAMP Receptor Protein Support a Quantitative Model of Differential Activation and Repression of CytR-Regulated Class III Escherichia coli Promoters

Holt, Allison K., Senear, Donald F.

Journal:

Year:

2013

Language:

english

File:

PDF, 651 KB

english, 2013

33

Determination of binding constants for cooperative site-specific protein-DNA interactions using the gel mobility-shift assay

Senear, Donald F., Brenowitz, Michael

Journal:

Journal of Biological Chemistry

Year:

1991

Language:

english

File:

PDF, 2.14 MB

english, 1991

34

Multiple ion-dependent and substrate-dependent sodium/potassium ATPase conformational states. Transient and steady-state kinetic studies

Senear, Donald F., Betts, Graham, Bernhard, Sidney A.

Journal:

Year:

1985

Language:

english

File:

PDF, 1.23 MB

english, 1985

35

Molecular characterization of the sex steroid binding protein (SBP) of plasma. Re-examination of rabbit SBP and comparison with the human, macaque and baboon proteins

Philip H. Petra, Pearl C. Namkung, Donald F. Senear, David A. McCrae, Kenneth W. Rousslang, David C. Teller, J.B.Alexander Ross

Journal:

Journal of Steroid Biochemistry

Year:

1986

Language:

english

File:

PDF, 1.23 MB

english, 1986

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